I feel the same way, even almost 2.5 years on T. I notice what has changed, but sometimes even things that are not male or female specifically remind me of my old self and trigger a wave of dysphoria. I can be looking at myself in the mirror and my eyes (which clearly are not "male" or "female" and clearly would not change with T) will trigger seeing my "old" self. Then I start to question how much I've really changed. Even though, logically, I know that I have changed drastically. It is really hard to describe and maybe I'm not making sense. But I do get where you're coming from, and it is normal. The only way I can deal with it is to take a deep breath, concentrate on the parts that I can see have changed and how well they've changed. If you're not on T, pick out things that don't bother you or maybe not even physical things that you like about yourself (or don't hate about yourself) and remind yourself that there are cis-men who share all of the same characteristics you see as "female". We are just more sensitive to it because of our history. I wish I had a way to make it stop... It is definitely a journey.