Ian,
you did the right thing by having a Dr. evaluate you after you had what appears to be a reaction. There are all kinds of reactions that can occur as a result of a sensitivity to a medication, and not all of them are dangerous.
The first time I had a testosterone injection, I had severe muscle pain in my deltoid muscle where it was given. That happened in about the same time frame as yours did. The other things I did not experience. Among possible reactions are migraines, which are severe, one sided headaches, but your Dr. would have to evaluate that. If your Dr. did not seem alarmed, then he probably either thought it wasn't a side effect or the side effect was not dangerous, such as an anaphylaxis reaction. While you have a clear memory, write down what you felt and how long after the injection the onset came as well as how long the reaction lasted. The next time you inject, see if you have the same reaction.
There is more than one way to get testosterone into you, and some don't cause the same reaction. For instance, Several years ago, every time I injected T, I would start to cough and feel the beginnings of an anaphylaxis reaction. My Dr. changed me to patches, and the reaction no longer happened. Sometimes its not a reaction to the T, but rather the carrier it comes in. Most T injections are in either cotton seed or sesame seed oil. That is what makes it so thick.
If you experience the same reaction the next time, you may need a different method of getting your T in. In the meantime, don't get too upset over it. You have options, and it doesn't mean you can't take T anymore.
sam1234